Bahlai, C. A. and E. F. Zipkin. 2020. The Dynamic Shift Detector: An algorithm to identify changes in parameter values governing populations. PLOS Computational Biology 16:e1007542.

Citable PDF link:

Populations naturally fluctuate in abundance, and the rules governing these fluctuations are a result of both internal (density dependent) and external (environmental) processes. For these reasons, pinpointing when changes in populations occur is difficult. In this study, we develop a novel break-point analysis tool for population time series data. Using a density dependent model to describe a population’s underlying dynamic process, our tool iterates through all possible break point combinations (i.e., abrupt changes in parameter values) and applies information-theoretic decision tools (i.e. Akaike’s Information Criterion corrected for small sample sizes) to determine best fits. Here, we develop the approach, simulate data under a variety of conditions to demonstrate its utility, and apply the tool to two case studies: an invasion of multicolored Asian ladybeetle and declining monarch butterflies. The Dynamic Shift Detector algorithm identified parameter changes that correspond to known environmental change events in both case studies.

DOI: 10.1371/journal.pcbi.1007542

Data URL:

Associated Datatables:

  1. Insect Populations via Sticky Traps

Associated Treatment Areas:

T8 T7 T6 T5 T4 T3 T2 T1

Download citation to endnote bibtex

Get PDF back to index
Sign In