Publications for the GWAS Switchgrass Diversity Panel

Publications associated with KBS LTER, GLBRC and LTAR projects. Click on the pdf link to get open access papers or to sign-in (free and immediate) to get other papers. Click on the data link to get formally published datasets (other datasets available as noted within the publications). Other ways to view KBS LTER publications can be accessed by the Research | Publications menu above.

Publications are also available on our KBS LTER Google Scholar page

  • 2024

    Tilhou, N. W., J. Bonnette, A. R. Boe, P. A. Fay, F. B. Fritschi, R. B. Mitchell, F. M. Rouquette Jr., Y. Wu, J. D. Jastrow, M. Ricketts, S. D. Maher, T. E. Juenger, and D. B. Lowry. 2024.Genomic prediction of regional-scale performance in switchgrass (Panicum virgatum) by accounting for genotype-by-environment variation and yield surrogate traits. G3 Genes|Genomes|Genetics doi: 10.1093/g3journal/jkae159 DOI: 10.1093/g3journal/jkae159

     (http://dx.doi.org/10.1093/g3journal/jkae159)
  • 2023

    Edwards, J. A., U. B. Saran, J. Bonnette, A. MacQueen, J. Yin, T. U. Nguyen, J. Schmutz, J. Grimwood, L. A. Pennacchio, C. Daum, T. Glavina del Rio, F. B. Fritschi, D. B. Lowry, and T. E. Juenger. 2023.Genetic determinants of switchgrass-root-associated microbiota in field sites spanning its natural range. Current Biology 33:1926-1938. DOI: 10.1016/j.cub.2023.03.078

    abstract    pdf abstract    pdf    
     (http://dx.doi.org/10.1016/j.cub.2023.03.078)
  • 2022

    Napier, J. D., J. Napier, P. P. Grabowski, J. T. Lovell, J. Bonnette, S. Mamidi, M. J. Gomez-Hughes, A. VanWallendael, X. Weng, Lori H. Handley, M. K. Kim, A. R. Boe, Philip A. Fay, F. B. Fritschi, J. D. Jastrow, J. Lloyd-Reilley, D. B. Lowry, R. Matamala, R. B. Mitchell, F. M. Jr, Y. Wu, J. Webber, T. Jones, K. Barry, J. Grimwood, J. Schmutz, and T. E. Juenger. 2022.A generalist–specialist trade-off between switchgrass cytotypes impacts climate adaptation and geographic range. PANS 119:e2118879119. DOI: 10.1073/pnas.2118879119

     (http://dx.doi.org/10.1073/pnas.2118879119)

  • VanWallendael, A., G. M. Benucci, P. B. da Costa, L. Fraser, A. Sreedasyam, F. Fritschi, T. E. Juenger, J. T. Lovell, G. Bonito, and D. B. Lowry. 2022.Host genotype controls ecological change in the leaf fungal microbiome. PLOS Biology 20:e3001681. DOI: 10.1371/journal.pbio.3001681

    abstract    pdf abstract    pdf    data 
     (http://dx.doi.org/10.1371/journal.pbio.3001681)

  • VanWallendael, A., D. B. Lowry, and J. A. Hamilton. 2022.One hundred years into the study of ecotypes, new advances are being made through large-scale field experiments in perennial plant systems. Current Opinion in Plant Biology 66: 102152. DOI: 10.1016/j.pbi.2021.102152

     (http://dx.doi.org/10.1016/j.pbi.2021.102152)
  • 2021

    Lovell, J., A. MacQueen, M. S, J. Bonnette, J. Jenkins, J. Napier, A. Sreedasyam, A. Session, A. Shengqiang Shu, K. Barry, S. Bonos, L. Boston, J. Chapman, C. Daum, S. Deshpande, A. Ewing, P. Grabowski, T. Haque, M. Harrison, A. Healey, J. Jiang, D. Kudrna, A. Lipzen, P. I. TH, C. Plott, P. Qi, E. Shakirov, D. Sims, A. Stewart, V. Singan, Y. Tang, S. Thibivillier, J. Webber, X. Weng, M. Williams, G. Wu, Y. Yoshinaga, M. Zane, L. Zhang, J. Zhang, K. Behrman, A. Boe, P. Fay, F. Fritschi, J. Jastrow, J. Lloyd-Reilley, R. Matamala, R. Mitchell, F. Rouquette Jr, P. Ronald, M. Saha, C. Tobias, M. Udvardi, R. Wing, Y. Wu, L. Bartley, M. Casler, K. Devos, D. Lowry, D. Rokhsar, J. Grimwood, T. Juenger, and J. Schmutz. 2021.Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass. Nature 590:438-444. DOI: 10.1038/s41586-020-03127-1

    abstract    pdf abstract    pdf    
     (http://dx.doi.org/10.1038/s41586-020-03127-1)
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