uid=KBS,o=lter,dc=ecoinformatics,dc=orgalluid=sbohm,o=lter,dc=ecoinformatics,dc=orgallpublicreadhttps://lter.kbs.msu.edu/datasets/108.emlThomasSchmidtUniversity of Michigan

Ann ArborMichiganUS

schmidti@umich.eduTracyTealMichigan State University

East LansingMichigan48824US

(517) 884-5371tkteal@msu.edu2026-03-14

original data source http://lter.kbs.msu.edu/datasets/108

LTERKBSKellogg Biological StationHickory CornersMichiganGreat LakesgenePopulationsDisturbanceLTER Core Research Areafarmingbiotahttps://apps.usgs.gov/thesaurus/thesaurus-full.php?thcode=15Data in the KBS LTER core database may not be published without written permission of the lead investigator or project director. These restrictions are intended mainly to preserve the primary investigators' rights to first publication and to ensure that data users are aware of the limitations that may be associated with any specific data set. These restrictions apply to both the baseline data set and to the data sets associated with specific LTER-supported subprojects.All publications of KBS data and images must acknowledge KBS LTER support.The areas around the Kellogg Biological Station in southwest Michigan-85.404699-85.36685742.42026542.3910192004-12-082010-07-02Kellogg Biological StationData Managerlter.data.manager@kbs.msu.eduhttp://lter.kbs.msu.edu02vkce854KBS LTERprogramNational Science Foundationhttp://dx.doi.org/10.13039/100000001DEB 2224712https%3A%2F%2Fnsf.gov%2Fawardsearch%2FshowAward%3FAWD_ID%3D2224712%26HistoricalAwards%3Dfalsehttps://lter.kbs.msu.edu/datatables/252Kellogg Biological Station LTER: Nitrite Reductase (nirK) Gene Sequences (KBS082-001)Gene sequences of the gene encoding nitrite reductase (nirK) were determined in soil samples taken from the Main Cropping System Experiment.Nitrite+Reductase+(nirK)+Gene+Sequences.csvNone291\ncolumn,no"\https://lter.kbs.msu.edu/datatables/252.csvsample_datedate of sample collectionYYYY-MM-DD11987-4-18treatmentLTER treatment LTER treatment replicateLTER replicateLTER replicateprimer_setprimer set used to isolate the sequenceprimer set used to isolate the sequencesequencing_methodsequencing method usedsequencing method usedgenetype of genetype of genepubmed_idpubmed_id for this gene if anypubmed_id for this gene if anyaccessiongene bank accession id if anygene bank accession id if anynamelocal lab name of the genelocal lab name of the genesequencesequencesequencehttps://lter.kbs.msu.edu/datatables/253Kellogg Biological Station LTER: Nitrite Reductase (nirK) Gene Sequences (KBS082-002)Gene sequences of the gene encoding nitrite reductase (nirK) extracted from soils of the Biodiversity Gradient Experiment at the LTER Main Site.Nitrite+Reductase+(nirK)+Gene+Sequences.csvNone231\ncolumn,no"\https://lter.kbs.msu.edu/datatables/253.csvsample_datedate of sample collectionYYYY-MM-DD11987-4-18plotLTER treatment- replicateLTER treatment- replicateschmidt_lab_IDunique sequence identifier used by Tom Schmidt's labunique sequence identifier used by Tom Schmidt's labsequencegene sequencegene sequencehttps://lter.kbs.msu.edu/datatables/377Kellogg Biological Station LTER: Methanotroph pmoA Gene Sequences (KBS082-003)Methanotroph pmoA gene sequences extracted from soils of the Main Cropping System Experiment. The number of pmoA (particulate methane monooxygenase subunit A) Operational Taxonomic Units (OTUs) is used to measure the diversity of methanotrophs in a given site. The number of pmoA OTUs was determined by creating clone libraries for pmoA, clustering the sequences at 94% similarity for an OTU and counting the number of OTUs for each site. The number of pmoA OTUs indicates the diversity of methanotrophs at a given site. Sequencing was done through MSU GTSF (Genomics Technology Support facility).Methanotroph+pmoA+Gene+Sequences.csvNone301\ncolumn,no"\https://lter.kbs.msu.edu/datatables/377.csvsample_datedate the sample was collectedYYYY-MM-DD11987-4-18treatmenttreatment that was sampledtreatment that was sampledreplicatereplicate plot that was sampledreplicate plot that was sampledprimer_setprimer set usedprimer set usedsequencing_methodsequencing method usedsequencing method usedgenegene studiedgene studiedpubmed_idaccession number to the pubmed databaseaccession number to the pubmed databaseaccessionaccession id to the genebank databaseaccession id to the genebank databasenamelab name of the sequencelab name of the sequencenotecomments or notescomments or notessequencegene sequencegene sequence