Nucleotide sequences observed at KBS and deposited in Genebank — Main Cropping System Experiment (MCSE)
Data in the KBS LTER core database may not be published without written permission of the lead investigator or project director Full terms of use
A list of nucleotide sequences from the Kellogg Biological Station that have been submitted to Genebank.
This datatable is part of the Nucleotide Sequences from the Kellogg Biological Station dataset.
Microbial nucleotide sequences isolated from soils collected from the LTER main cropping system experiment.
Note
| Experiment: | Main Cropping System Experiment (MCSE) |
| Dataset: | KBS095 |
| Datatable ID: | KBS095-001.8 |
| Core Areas | Populations |
| Repository link: | http://doi.org/10.6073/pasta/e2c5c82f88dccd99a3015e911e6cacb6 |
| Personnel: |
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| Last Updated | 2023-10-24 |
| Variate | Description | Units |
|---|---|---|
| sequenceid | gene bank sequence id | |
| accession number | gene bank accession number | |
| organism | the organism that the gene sequence comes from | |
| taxonomy | taxonomy of the organism | |
| description | description of the organism | |
| isolation source | where the organism was isolated from | |
| collection date | the date the sample or organism was collected | |
| authors | authors |
| Protocols |
|---|
Data Excerpt
| seqid | accession_number | organism | taxonomy | description | isolation_source | collection_date | authors |
|---|---|---|---|---|---|---|---|
| gb|KC176354.1|gi|459256850 | KC176354 | Bjerkandera adusta | Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Polyporales; Meruliaceae; Bjerkandera | Bjerkandera adusta isolate X-75 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | washed organic particles from mineral soil (A horizon) of Kellogg Biological Station LTER T7R1, near Gull Lake, Michigan, isolated by R.G. Thorn 10-Jun-1994 | 1994-04-10 | Thorn,R.G. Redy,C.A. Haris,D. Paul,E.A. |
| gb|KC176352.1|gi|459256848 | KC176352 | Sebacinaceae sp. X-76 | Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Sebacinales; Sebacinaceae | Sebacinaceae sp. X-76 28S ribosomal RNA gene, partial sequence | washed organic particles from mineral soil (A horizon) of Kellogg Biological Station LTER T7R1, near Gull Lake, Michigan, isolated by R.G. Thorn 10-Jun-1994 | 1994-04-10 | Thorn,R.G. Redy,C.A. Haris,D. Paul,E.A. |
| gb|KC176348.1|gi|459256844 | KC176348 | Daedaleopsis confragosa | Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Polyporales; Daedaleopsis | Daedaleopsis confragosa isolate X-78 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | washed organic particles from mineral soil (A horizon) of Kellogg Biological Station LTER Conifer Forest #2 plot, near Gull Lake, Michigan, isolated by R.G. Thorn 10-Jun-1994 | 1994-04-10 | Thorn,R.G. Redy,C.A. Haris,D. Paul,E.A. |
| gb|KC176346.1|gi|459256842 | KC176346 | Trametes versicolor | Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Polyporales; Trametes | Trametes versicolor isolate X-69 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | washed organic particles from mineral soil (A horizon) of Kellogg Biological Station LTER T7R3, near Gull Lake, Michigan, isolated by R.G. Thorn 10-Jun-1994 | 1994-04-10 | Thorn,R.G. Redy,C.A. Haris,D. Paul,E.A. |
| gb|KC176344.1|gi|459256840 | KC176344 | Trametes versicolor | Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Polyporales; Trametes | Trametes versicolor isolate X-65 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | washed organic particles from mineral soil (A horizon) of Kellogg Biological Station LTER T2R3, near Gull Lake, Michigan, isolated by R.G. Thorn 10-Jun-1994 | 1994-04-10 | Thorn,R.G. Redy,C.A. Haris,D. Paul,E.A. |